MicrobeRX’s documentation

GENERAL:

• Description
• Requirements
• Installation
• Tutorials
• Workflow
• Command line
• Citation
• License
• Information
• Disclaimer

EXAMPLES:

• Generation of Reaction Rules
• Loading the modules to handle reactions of MicrobeRX
• Getting biotransformation data
• Loading the biotransformation data into MicrobeRX
• Single Reactant Reactions
• Reaction Rules
• Prediction of metabolites by MicrobeRX
  • Loading the modules and data files of MicrobeRX
  • Prediction of metabolites
  • Analysis and Visualization
• OmicsIntegrator
  • Loading the modules to work with omics data of MicrobeRX
  • Identification of organisms involved in the biotransformations
  • Retriving sequences from online databases
  • Multi Sequence Aligment (MSA)
  • Aligment chart and sequence logo
  • Protein families using InterPro
• API Reference
  • microberx

Indices and tables

• Index

• Module Index

• Search Page